i2b2: Informatics for Integrating Biology & the Bedside - A National Center for Biomedical Computing
Software

Version: 1.4
Release Date: February 2010
License: i2b2 Open Source License
Operating System: Windows, Macintosh
Programming Language(s): Java

Description: The i2b2 Workbench is a collection of client-side components that communicate with i2b2 Cells and help aggregate their functionality in the Hive. Each component is designed as an Eclipse-based plug-in that interacts with a hive cell; collectively these plug-ins provide a cohesive entity to tie all the i2b2 cells together.

Version: 1.4
Release Date: February 2010
License: i2b2 Open Source License
Operating System: Windows, Macintosh
Programming Language(s): Java

Below is the source code for the i2b2 Workbench (client) application that communicates with i2b2 Hive Cells via i2b2 XML messages. The application is distributed as a zip file. A document describing how to import the zip file into the Eclipse IDE is included under the Documents tab.

Select the appropriate file below for download

Download File Size Type
i2b2Workbench-src-14.zip 84 MB Windows, Macintosh Eclipse Project
i2b2Workbench-src-15.zip 82 MB Windows, Macintosh Eclipse Project
i2b2Workbench-src-152.zip 82 MB Windows, Macintosh Eclipse Project
i2b2Workbench-src-154.zip 82 MB Windows, Macintosh Eclipse Project
i2b2Workbench-src-16.zip 82 MB Windows, Macintosh Eclipse Project
i2b2Workbench-src-1602.zip 82 MB Windows, Macintosh Eclipse Project
i2b2Workbench-src-1603.zip 72 MB Windows, Macintosh Eclipse Project
i2b2Workbench-src-1604.zip 72 MB Windows, Macintosh Eclipse Project
i2b2Workbench-src-1605.zip 72 MB Windows, Macintosh Eclipse Project
i2b2Workbench-src-1608.zip 72 MB Windows, Macintosh Eclipse Project
i2b2Workbench-src-1609.zip 72 MB Windows, Macintosh Eclipse Project
i2b2Workbench-src-1700.zip 98 MB Windows, Macintosh Eclipse Project
i2b2Workbench-src-1702.zip 98 MB Windows, Macintosh Eclipse Project
i2b2Workbench-src-1704.zip 98 MB Windows, Macintosh Eclipse Project
i2b2Workbench-src-1705.zip 98 MB Windows, Macintosh Eclipse Project
i2b2Workbench-src-1706.zip 98 MB Windows, Macintosh Eclipse Project
i2b2Workbench-src-1707.zip 98 MB Windows, Macintosh Eclipse Project
i2b2Workbench-src-1708.zip 98 MB Windows, Macintosh Eclipse Project
i2b2WB-src-2001.zip 98 MB  

Version: 1.4
Release Date: February 2010
License: i2b2 Open Source License

The executable i2b2 Workbench is available below. Unpack these files after you upload them and run the application named i2b2Workbench.exe. Log in as User "demo" with the Password "demouser". When the program begins, a tutorial is available. To use the workbench, click on "Go to the workbench".

Select the appropriate file below for download

Download File Size Type
i2b2Workbench-win-14.zip 110 MB Windows v1.4 Slim
(Core Cells Only)
i2b2Workbench-win-15.zip 95 MB Windows v1.5 Slim
(Core Cells Only)
i2b2Workbench-win-152.zip 95 MB Windows v1.5.2 Slim
(Core Cells Only)
i2b2Workbench-win-154.zip 95 MB Windows v1.5.4 Slim
(Core Cells Only)
i2b2Workbench-win-16.zip 95 MB Windows v1.5 Slim
(Core Cells Only)
i2b2Workbench-win-1602.zip 95 MB Windows v1.602 Slim
(Core Cells Only)
i2b2Workbench-win-1603.zip 98 MB Windows v1.603 Slim
(Core Cells Only)
i2b2Workbench-win-1604.zip 98 MB Windows v1.603 Slim
(Core Cells Only)
i2b2Workbench-win-1605.zip 98 MB Windows v1.605 Slim
(Core Cells Only)
i2b2Workbench-win-map-10RC1.zip 98 MB Windows v1.604
Ontology Mapping
NCBOIntegrationTool_1.0.zip 98 MB Windows v1.0
NCBO Integration Tool
NCBOExtractionTools_1.1.zip 98 MB Windows v1.0
NCBO Extraction Tool
edu.harvard.i2b2.eclipse.plugins.timeAlign_1.6.4.jar 2 MB Plugin v1.0
TimeAlign
i2b2crctesterplugin-src-1000.zip 31 MB Plugin v1.0
CRC Tester Src
i2b2crctesterplugin-jar-win-1000.zip 1 MB Plugin v1.0
CRC Tester Windows
i2b2crctesterplugin-jar-mac-1000.zip 1 MB Plugin v1.0
CRC Tester Macintosh
i2b2Workbench-win-1608.zip 98 MB Windows v1.608 Slim
(Core Cells Only)
i2b2Workbench-win-1609.zip 98 MB Windows v1.608 Slim
(Core Cells Only)
i2b2Workbench-win-1700.zip 106 MB Windows v1.700 Slim
(Core Cells Only)
i2b2Workbench-win-1702.zip 106 MB Windows v1.700 Slim
(Core Cells Only)
i2b2Workbench-win-1704.zip 106 MB Windows v1.700 Slim
(Core Cells Only)
Windows_MetaMap_Demo.zip 106 MB Windows Meta Map
Macintosh-MetaMap.zip 106 MB Macintosh Meta Map
i2b2Workbench-win-1705.zip 106 MB Windows v1.705 Slim
(Core Cells Only)
MetaMap-win-1-1.zip 106 MB Windows v1.1 MetaMap
i2b2Workbench-win-1706.zip 106 MB Windows v1.706 Slim
(Core Cells Only)
i2b2Workbench-win-1707.zip 106 MB Windows v1.707 Slim
(Core Cells Only)
i2b2Workbench-win-1708.zip 106 MB Windows v1.706 Slim
(Core Cells Only)
i2b2WB-VM-lin-mac-2001.zip 106 MB VM Mac
i2b2WB-win-2001.zip 106 MB Windows v1.706 Slim
(Core Cells Only)
i2b2Workbench-mac-14.zip 72 MB Windows v1.4 Slim
(Core Cells Only)
i2b2Workbench-mac-15.zip 62 MB Windows v1.5 Slim
(Core Cells Only)
i2b2Workbench-mac-152.zip 62 MB Windows v1.5.2 Slim
(Core Cells Only)
i2b2Workbench-mac-154.zip 62 MB Macintosh v1.5.4 Slim
(Core Cells Only)
i2b2Workbench-mac-16.zip 62 MB Windows v1.5 Slim
(Core Cells Only)
i2b2Workbench-mac-1602.zip 62 MB Windows v1.602 Slim
(Core Cells Only)
i2b2Workbench-mac-1603.zip 67 MB Windows v1.603 Slim
(Core Cells Only)
i2b2Workbench-mac-1604.zip 67 MB Windows v1.603 Slim
(Core Cells Only)
i2b2Workbench-mac-1605.zip 67 MB Windows v1.605 Slim
(Core Cells Only)
i2b2Workbench-mac-1608.zip 67 MB Windows v1.608 Slim
(Core Cells Only)
i2b2Workbench-mac-1609.zip 67 MB Windows v1.608 Slim
(Core Cells Only)
i2b2Workbench-mac-1700.zip 75 MB Windows v1.700 Slim
(Core Cells Only)
i2b2Workbench-mac-1702.zip 75 MB Windows v1.700 Slim
(Core Cells Only)
i2b2Workbench-mac-1704.zip 75 MB Windows v1.700 Slim
(Core Cells Only)
i2b2Workbench-mac-1705.zip 75 MB Windows v1.705 Slim
(Core Cells Only)
MetaMap-mac-1-1.zip 75 MB Macintosh v1.1 MetaMap
i2b2Workbench-mac-1706.zip 75 MB Windows v1.706 Slim
(Core Cells Only)
i2b2Workbench-mac-1707.zip 75 MB Windows v1.707 Slim
(Core Cells Only)
i2b2Workbench-mac-1708.zip 75 MB Windows v1.706 Slim
(Core Cells Only)
i2b2WB-VM-lin-src-2001.zip 75 MB VM Linux

Messages used by the i2b2 Workbench are validated with the following XSDs.

i2b2_xsds-11.zip (all XSD files)
A .zip file containing all three of the XSD files below.

i2b2-11.xsd
This schema is included in the i2b2_request.xsd and the i2b2_response.xsd. It defines the tag.

i2b2_request-11.xsd
This schema is used for validating i2b2 request messages.

i2b2_response-11.xsd
This schema is used for validating i2b2 response messages.

i2b2 Workbench Developers Guide v1.4 (PDF file) - This document describes how to set up and run the client software within the Eclipse IDE.

i2b2 Workbench Users Guide v1.3.2 (PDF file) - This document describes how to install and run the application.

i2b2 Workbench Description v1.0 (PDF file) - This document provides a comprehensive description of the i2b2 Workbench platform.

i2b2 Workbench Tutorial v1.2 (PDF file) - This document provides a tutorial of the i2b2 Workbench application.

Screenshot of i2b2 Workbench Client

No support information is currently available for this project. Please check back later.

Click the (+) and (-) icons below to expand and collapse the listing of archived files available for download from a particular version of the project.

+ Version: 1.0

+ Version: 1.1

+ Version: 1.2

+ Version: 1.2.1

+ Version: 1.3

+ Version: 1.3.1

+ Version: 1.3.2

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