i2b2: Informatics for Integrating Biology & the Bedside - A National Center for Biomedical Computing
Software i2b2 Software

These i2b2 cells and plugins have been developed by the i2b2 team over the last decade. Although they are no longer supported, they are representative of the features and technologies that can be added to i2b2's componentized infrastructure.


Optional Components

Optional components are available below for download:

DownloadFile SizeType
i2b2PFT-src-13.zip 35 MB Zip PFT Client/Server Source v1.3
i2b2NLP-src-10.zip 13 MB Zip NLP Client/Server Source v1.0
CorrelationAnalysis-client-src-10.zip 3.5 MB Zip Correlation Analysis Client Source v1.0
HPC-src-10.zip 6.7 MB Zip HPC Client/Server source v1.0
i2b2crcplugin-patientcount-17.zip 38 MB Zip CRC Patient Count Plug-in v1.7
i2b2tableview-14.zip 26 MB Zip Table View Plug-in v1.4
i2b2DerivedDataMarts-src-14.zip 97 kB Zip Derived Data Marts v1.4
i2b2exportdata-15.zip 8.6 MB Zip Export Data Plug-in v1.5
i2b2annotator-15.zip 5.4 MB Zip Annotator Plug-in v1.5
i2b2textanalyzer-15.zip 638 kB Zip Text Analyzer Plug-in v1.5
i2b2importdata-15.zip 16 MB Zip Import Data Plug-in v1.5
  • High Performance Computing
  • i2b2 Workbench Plug-in
  • The High Performance Computing plug-in allows users to take advantage of resources available on a remote location, generally a compute cluster.
  • Installation Guide
  • Messaging Guide
  • Design Document
  • Plug-in is downloaded through workbench
  • Text Analyzer
  • i2b2 Workbench Plug-in
  • The Text Analyzer plug-in allows for the decrypting and view of the notes data in the CRC.
  • Help Guide
  • Plug-in is downloaded through workbench
  • Export Tool
  • i2b2 Workbench Plug-in
  • The export data view will enable users to export data from the dimension and mapping tables
  • Help Guide
  • Plug-in is downloaded through workbench
  • Correlation Analysis
  • i2b2 Workbench Plug-in
  • This specialized analysis cell uses mutual information theory to calculate observed correlations within the data of the hive. This type of cell represents an important achievement of the hive.
  • Installation Guide
  • Messaging Guide
  • Design Document
  • Plug-in is downloaded through workbench
  • Import Tool
  • i2b2 Workbench Plug-in
  • The import data view will enable users to import data into the dimension and mapping tables
  • Help Guide
  • Plug-in is downloaded through workbench
  • Table View Plug-in
  • i2b2 Workbench Plug-in
  • The i2b2 plug-in for viewing data in various tables and other graphical forrmats.
  • Help Guide
  • Plug-in is downloaded through workbench
  • Patient Counts Plug-in
  • Optional Server Side CRC Plug-in
  • This server-side CRC plug-in calculates patient count breakdown for the children of a given concept. It is used in conjunction with an enhanced ontology workbench plug-in.
  • Functional Specification
  • Download below
  • Annotator Tool
  • i2b2 Workbench Plug-in
  • The annotator view will allow non-expert NLP users viewing tools for NLP output
  • Help Guide
  • Plug-in is downloaded through workbench
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